PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0109969.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 212aa    MW: 24666.3 Da    PI: 6.5054
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0109969.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.76.3e-12128102129
              NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
                      ++ktLvfykgrap+g+k+dW+mheyrle
  Lj0g3v0109969.1   1 MRKTLVFYKGRAPNGQKSDWIMHEYRLE 28 
                      89************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023652.3E-4127IPR003441NAC domain
SuperFamilySSF1019414.71E-17150IPR003441NAC domain
PROSITE profilePS5100522.351150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MRKTLVFYKG RAPNGQKSDW IMHEYRLETN ENGSTLHQEE GWVVCRVFKK RMTTSQKMGE  60
YESHCWYEDQ VSFMQDLESP RPIPHHPYAT YPNCKAELDQ LQYNMAQDHF LQLPQLESPK  120
VTQSPPTSLV HYVYASNGST LQLSSLTQEE IHVQNLHHQT LHSLDQVTDW RVLDKFVASQ  180
LSHDQDHGSK ETSYSQEHTS TSTSSGQINL WK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358651e-32AC235865.2 Glycine max clone GM_WBb0117N07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007039928.14e-88NAC domain protein, IPR003441 isoform 1
SwissprotQ9FWX28e-54NAC7_ARATH; NAC domain-containing protein 7
TrEMBLA0A061GBJ74e-88A0A061GBJ7_THECC; NAC domain protein, IPR003441 isoform 1
TrEMBLA0A151SKU24e-88A0A151SKU2_CAJCA; NAC domain-containing protein 7
STRINGGLYMA05G04250.28e-87(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.15e-55NAC 007